CAZy

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CAZy
Database.png
Content
Description carbohydrate-active enzymes database
Contact
Research center AFMB, French National Centre for Scientific Research
Laboratory Glycogenomics group
Primary citation Lombard & al. (2014)[1]
Access
Website http://www.cazy.org/
Tools
Web http://research.ahv.dk/cazy

http://mothra.ornl.gov/cgi-bin/cat/cat.cgi

http://csbl.bmb.uga.edu/dbCAN/

CAZy is a database of Carbohydrate-Active enZYmes (CAZymes).[1][2] The database contains a classification and associated information about enzymes involved in the synthesis, metabolism, and transport of carbohydrates. Included in the database are glycoside hydrolases, glycosyltransferases, polysaccharide lyases, carbohydrate esterase and carbohydrate-binding families.

CAZy was established in 1999 in order to provide online and constantly updated access to the family classification of CAZymes.[1] New genomes are added shortly after they appear in the daily releases of GenBank.[3] As of November 2013, CAZy contains sequence information on nearly 340,000 CAZymes.[1]

The CAZy database is coupled with the CAZypedia online encyclopedia, which was launched in June 2009 and intended to be a wiki-based encyclopedia of CAZymes.[4][5] As of 2014, CAZy is developed by the Glycogenomics group at AFMB, a research centre affiliated with the French National Centre for Scientific Research and Aix-Marseille University.[6][7]

Classification

CAZy identifies evolutionary related families of glycosyl hydrolases using the classification introduced by Bernard Henrissat.[8][9] As of 2012 CAZy contains 131 families of glycosyl hydrolase families. These families are given a number to identify them, so for example Glycosyl hydrolase family 1 contains enzymes that possess a TIM barrel fold. These families are clustered into 14 different clans that share structural similarity. CAZy contains 94 families of Glycosyl transferase enzymes,[10] 22 families of polysaccharide lysases[11] and 16 families of carbohydrate esterases.

References

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External links

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